LIVIA — Tutorials

Step-by-step visual walkthroughs for each LIVIA tool

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Learn LIVIA by Example

Each tutorial below walks through a real workflow with auto-advancing screenshots. Click any step to jump to it, or let it play through automatically. Ready to try it yourself? Click the Try it button.

Prediction Analysis

Upload prediction files from any platform and analyze interface confidence

Try it →
1
Upload your prediction files or select example files
2
Review confidence metrics — iLIS, ipSAE, ipTM for each model
3
Explore PAE, LIS, and cLIS heatmaps across all models
4
Sequence Viewer — interaction residues highlighted
5
Linear Contact Map — cLIR residue pairs within Cβ 8 Å
6
View the 3D structure in Mol* viewer
7
Adjust color presets for the visualization
8
Download ChimeraX/PyMOL script and structure file
Tutorial step
Upload your prediction files or select example files
LIVIA GitHub · AFM-LIS GitHub · FlyPredictome · AlphaFold DB
LIVIA v0.1 · Ah-Ram Kim (Harvard Medical School)